The detailed information of tRNA gene sequence


Sequence ID>WENV180097175
Genome IDMTBK01172683
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 8704
End posion on genome 8613
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
attatatact
tRNA gene sequence 
GGAGAGGTGGCTGAGTACGGCTGAAGGCGCTCGATTGGAAATCGAGTAACGTGTGAAAGC
GTTCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttaatttcta
Secondary structure (Cloverleaf model)
>WENV180097175	Ser	GGA
                   t      GCCA ttaatttcta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    A T G A        G      | | | | |     A
  C         G T C G       G T G G G     C
  G           + | |                 T T
  G         A G G C
    C T G A        G     TAACGTGTGAAAGCGTTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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