The detailed information of tRNA gene sequence


Sequence ID>WENV180097177
Genome IDMTBK01172747
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 184
End posion on genome 110
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaacggtctT
tRNA gene sequence 
AGGCCAGTAGCTCTAATGGTAGAGCGCCGGTCTCCAAAACCGGACGTTGTGGGTTCGAGT
CCTACCTGGCCTGGta
Downstream region at tRNA end position 
gcaaaataac
Secondary structure (Cloverleaf model)
>WENV180097177	Trp	CCA
                   T      GGta gcaaaataac
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C A T C C     A
      A A T        A      | | + | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ACGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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