The detailed information of tRNA gene sequence


Sequence ID>WENV180097179
Genome IDMTBK01172937
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 4037
End posion on genome 4111
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tgaaataaac
tRNA gene sequence 
GGGGCATTAGCTCATCTGGCTAGAGCGTTTGACTGGCAGTCAAAAGGTGACGAGTTCGAG
TCTCGTATGCTCCACtg
Downstream region at tRNA end position 
aaaaaggctt
Secondary structure (Cloverleaf model)
>WENV180097179	Ala	GGC
                   c      ACtg aaaaaggctt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T
                     T - A          T G
                    T     T G C T C     A
      C T A        A      | | | | |     G
    T       C T C G       A C G A G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTG
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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