The detailed information of tRNA gene sequence


Sequence ID>WENV180097180
Genome IDMTBK01173045
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 4916
End posion on genome 5010
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tatttgtgat
tRNA gene sequence 
GGGGATAGATAGGTGCTGGTGTGCCTCCTGGTCTTCAAAATCAGTTGCGGGGCGGAATCG
TCCTGGGTGGGTTCAATTCCCACATATTCCCGCCA
Downstream region at tRNA end position 
aattaaggag
Secondary structure (Cloverleaf model)
>WENV180097180	SeC	TCA
                   t      GCCA aattaaggag
                     G - C
                     G - C
                     G - C
                     G + T
                     A - T
                     T - A
                     A - T
                     G   A          T T
                    A     C A C C C     A
      T C G        T      | | | | |     A
    G       T G G A       G T G G G     C
    G       + | | |                 T T
    T       G C C T
      G T          C     TTGCGGGGCGGAATCGTCCTGG
                    C - G
                    T - A
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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