The detailed information of tRNA gene sequence


Sequence ID>WENV180097182
Genome IDMTBK01173105
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1725
End posion on genome 1799
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tatagcagtc
tRNA gene sequence 
GGCGACGTAGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTTTATGCACCGGTTCAAATC
CGGTCGTCGCCTCCA
Downstream region at tRNA end position 
gcctttgccg
Secondary structure (Cloverleaf model)
>WENV180097182	Cys	GCA
                   c      TCCA gcctttgccg
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G G C C     A
        G A        A      | | | | |     A
      T     A C C G       A C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATGC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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