The detailed information of tRNA gene sequence


Sequence ID>WENV180097185
Genome IDMTBK01173221
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1
End posion on genome 97
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAGGCAGATGGGTTCTGGTGTGCCCCGCGGTCTTCAAAACCGTTGAGGGGGGTTAGGAG
CCTCCCGGGTGAGTTCGATTCTCACATGCTTCCGCCA
Downstream region at tRNA end position 
atcggaacgc
Secondary structure (Cloverleaf model)
>WENV180097185	SeC	TCA
                   n      GCCA atcggaacgc
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     C - G
                     A - T
                     G   A          T T
                    A     C A C T C     A
      T C T        T      | | | | |     G
    G       T G G G       G T G A G     C
    G       + | | |                 T T
    T       G C C C
      G T          C     TGAGGGGGGTTAGGAGCCTCCCGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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