The detailed information of tRNA gene sequence


Sequence ID>WENV180097192
Genome IDMTBK01173838
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 380
End posion on genome 308
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aaatcgaaac
tRNA gene sequence 
GGTCGGTTCATCTAAGGGTTAGGATTCAAGATTTTCATTCTTGCCATAGGGGTTCGAATC
CCCTACCGACTGCta
Downstream region at tRNA end position 
atttcattaa
Secondary structure (Cloverleaf model)
>WENV180097192	Glu	TTC
                   c      GCta atttcattaa
                     G + T
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     T C C C C     A
      G A A        C      | | | | |     G
    G       T C T A       A G G G G     C
    G       + | | |                 T T
    T       G G A T
      T A          T     CCAT
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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