The detailed information of tRNA gene sequence


Sequence ID>WENV180097198
Genome IDMTBK01174151
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 477
End posion on genome 562
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctagcaaagt
tRNA gene sequence 
GGAAGCGTCGCATAGCGGTCAATTGCACACGCTTGGAAAGCGTGAGCCTCACGGCTTCGT
GGGTTCAAATCCCACCGCTTCCGCCA
Downstream region at tRNA end position 
ttcttcgaca
Secondary structure (Cloverleaf model)
>WENV180097198	Ser	GGA
                   t      GCCA ttcttcgaca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        C      | | | | |     A
    G       T A C G       G T G G G     C
    G         | | |                 T T
    T       T T G C
      C A A        A     AGCCTCACGGCTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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