The detailed information of tRNA gene sequence


Sequence ID>WENV180097204
Genome IDMTBK01174846
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 401
End posion on genome 476
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
aatataaagt
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGCGGAACGTTCGCAATGTTCAGGTCAGGGGTTCAATT
CCCCTTAGCTCCACCA
Downstream region at tRNA end position 
tcttatcatt
Secondary structure (Cloverleaf model)
>WENV180097204	Ala	CGC
                   t      ACCA tcttatcatt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T T
                    T     T C C C C     A
      C G A        A      | | | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    G - C
                    A - T
                    A - T
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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