The detailed information of tRNA gene sequence


Sequence ID>WENV180097216
Genome IDMTBK01175249
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 8665
End posion on genome 8576
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgtcattgaa
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCTAAGGCGCGCGCCTGGAAAGTGCGTAAACTCCAAAAGGGT
TTCGCGGGTTCGAATCCCGCCTTCTCCGCCg
Downstream region at tRNA end position 
gtttttattt
Secondary structure (Cloverleaf model)
>WENV180097216	Ser	GGA
                   a      GCCg gtttttattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TAAACTCCAAAAGGGTTTC
                    C - G
                    G - C
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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