The detailed information of tRNA gene sequence


Sequence ID>WENV180097222
Genome IDMTBK01175361
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 255
End posion on genome 329
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ttagaaaaaa
tRNA gene sequence 
GGGTGTGTAGCTCAGCTGGCTAGAGCGCGTCACTGATAATGACGAGGTCCCTGGTTCAAG
TCCAGGCATACCCACac
Downstream region at tRNA end position 
aataggggcc
Secondary structure (Cloverleaf model)
>WENV180097222	Ile	GAT
                   a      ACac aataggggcc
                     G - C
                     G - C
                     G - C
                     T - A
                     G + T
                     T - A
                     G - C          T G
                    T     G G A C C     A
      C G A        A      | | | | |     A
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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