The detailed information of tRNA gene sequence


Sequence ID>WENV180097223
Genome IDMTBK01175361
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 337
End posion on genome 410
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cacacaatag
tRNA gene sequence 
GGGCCGATGGCTCAATTGGTAGAGCATCTCATTTGCAATGAGAGGGTTCAGGGTTCGAGT
CCCTGTCGGTCCACaa
Downstream region at tRNA end position 
gggaaaagca
Secondary structure (Cloverleaf model)
>WENV180097223	Ala	TGC
                   g      ACaa gggaaaagca
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     A - T          T G
                    T     G T C C C     A
      T A A        G      | | | | |     G
    T       C T C G       C A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTT
                    T - A
                    C - G
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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