The detailed information of tRNA gene sequence


Sequence ID>WENV180097225
Genome IDMTBK01175566
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 136
End posion on genome 61
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
cgcggagcgc
tRNA gene sequence 
GCCCCAATAGCTCAGTTGGTAGAGCAACTGTTTCGTAAATAGTAGGTCGGCGGTTCGAGT
CCGTCTTGGGGCACCA
Downstream region at tRNA end position 
ttcctcgcgc
Secondary structure (Cloverleaf model)
>WENV180097225	Thr	CGT
                   c      ACCA ttcctcgcgc
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T
                     A - T          T G
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G + T
                    T - A
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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