The detailed information of tRNA gene sequence


Sequence ID>WENV180097232
Genome IDMTBK01175677
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1903
End posion on genome 1830
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
attccatcaa
tRNA gene sequence 
GGGCCCGTAGCTCAATGGCGGAGCAGGCGGCTCATAACCGCTTGGTTGTTGGTTCGAATC
CATCCGGGCCCACCt
Downstream region at tRNA end position 
aaaatcgcgt
Secondary structure (Cloverleaf model)
>WENV180097232	Ile2	CAT
                   a      ACCt aaaatcgcgt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T A C C     A
        A A        A      |   | | |     G
      T     C T C G       G T T G G     C
      G     | | | |                 T T
      G     G A G C
        C G        A     TGGTT
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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