The detailed information of tRNA gene sequence


Sequence ID>WENV180097247
Genome IDMTBK01176137
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1110
End posion on genome 1184
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
agttttttga
tRNA gene sequence 
GCCGGCGTAGCTCAACGGCAGAGCAACGGTTTCGTAAACCGTAGGTTATGGGTTCGATTC
CCTTCGCCGGCTCCA
Downstream region at tRNA end position 
ctgagtctca
Secondary structure (Cloverleaf model)
>WENV180097247	Thr	CGT
                   a      TCCA ctgagtctca
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    T     T T C C C     A
        A A        A      |   | | |     G
      C     C T C G       A T G G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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