The detailed information of tRNA gene sequence


Sequence ID>WENV180097249
Genome IDMTBK01176399
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3743
End posion on genome 3670
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tcgatgcata
tRNA gene sequence 
GGGCTCGTGGTCTAGCCGGTTATGACGTCGCCTTCACACGGCGAAGATCGCCAGTTCGAA
TCTGGCCGGGCCCAtga
Downstream region at tRNA end position 
ttttctttcc
Secondary structure (Cloverleaf model)
>WENV180097249	Val	CAC
                   a      Atga ttttctttcc
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     C G G T C     A
      C G A        G      | | | | |     G
    C       T C T G       G C C A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGATC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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