The detailed information of tRNA gene sequence


Sequence ID>WENV180097252
Genome IDMTBK01176824
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 28674
End posion on genome 28752
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tgatgcatgT
tRNA gene sequence 
GCTGCTATAGTGTAGACCGGCCAATCATGTGGGACTCTCACTCCCACGACTGGGGTTCGA
ATCCCCATAGCAGCATCC
Downstream region at tRNA end position 
tgttcttcgg
Secondary structure (Cloverleaf model)
>WENV180097252	Glu	CTC
                   T      ATCC tgttcttcgg
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     A C C C C     A
    C A G A        A      | | | | |     G
  C         T G T G       T G G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        G     CGAC
                    T - A
                    G - C
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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