The detailed information of tRNA gene sequence


Sequence ID>WENV180097256
Genome IDMTBK01176873
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3516
End posion on genome 3439
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ccgaaccggt
tRNA gene sequence 
CGGGATGTAGCGCAGTCCGGTTAGCGCGCTCGGTTCGGGACCGAGAAGTCGGAGGTTCAA
ATCCTCTCATCCCGACCA
Downstream region at tRNA end position 
ttttttgttc
Secondary structure (Cloverleaf model)
>WENV180097256	Pro	CGG
                   t      ACCA ttttttgttc
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T C T C C     A
    C T G A        A      + | | | |     A
  C         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AAGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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