The detailed information of tRNA gene sequence


Sequence ID>WENV180097257
Genome IDMTBK01176939
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 64441
End posion on genome 64515
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cgttctacct
tRNA gene sequence 
TCCCTGGTAGCTCAATCGGCAGAGCGGGCGGCTGTTAACCGCTAGGTTAGAGGTTCGAGT
CCTCTCCGGGGAGCCt
Downstream region at tRNA end position 
tcggacaaga
Secondary structure (Cloverleaf model)
>WENV180097257	Asn	GTT
                   t      GCCt tcggacaaga
                     T - A
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C
                     G - C          T G
                    T     T C T C C     A
      T A A        A      | | | | |     G
    C       C T C G       A G A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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