The detailed information of tRNA gene sequence


Sequence ID>WENV180097258
Genome IDMTBK01176939
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 64583
End posion on genome 64657
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
cgcgagataT
tRNA gene sequence 
GGTCCTGTAGCTCAATCGGCAGAGCAAGCGCCTCTTAAGCGTTAGGTTCTCGGTTCGAGT
CCGAGCAGGATCATtc
Downstream region at tRNA end position 
tgttttaatt
Secondary structure (Cloverleaf model)
>WENV180097258	Lys	CTT
                   T      ATtc tgttttaatt
                     G - C
                     G + T
                     T - A
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     G A G C C     A
      T A A        A      | | | | |     G
    C       C T C G       C T C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    A - T
                    G + T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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