The detailed information of tRNA gene sequence


Sequence ID>WENV180097259
Genome IDMTBK01176939
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 74330
End posion on genome 74418
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgttgaacct
tRNA gene sequence 
GGAGAGATGCCGGAGTGGTTGATCGGGGCGGTCTCGAAAACCGTTGTGGGACTTGTGCCC
ACCGTGGGTTCGAATCCCACTCTCTCCGCtg
Downstream region at tRNA end position 
actttggact
Secondary structure (Cloverleaf model)
>WENV180097259	Ser	CGA
                   t      GCtg actttggact
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    T       T C G G
      T G A        G     TGTGGGACTTGTGCCCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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