The detailed information of tRNA gene sequence


Sequence ID>WENV180097260
Genome IDMTBK01176939
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 113174
End posion on genome 113261
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtgcctgccc
tRNA gene sequence 
GGAGAGGTCGCATAGTTGGTCTAGTGCGCTCGCTTGGAAAGCGAGTATACCGAGAGGTAT
CAAGGGTTCGAATCCCTTCCTCTCCGCCt
Downstream region at tRNA end position 
tataatagtc
Secondary structure (Cloverleaf model)
>WENV180097260	Ser	GGA
                   c      GCCt tataatagtc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
    T T G A        C      | | | | |     G
  G         T A C G       A A G G G     C
  G         + | | |                 T T
  T         G T G C
    C T A          G     TATACCGAGAGGTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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