The detailed information of tRNA gene sequence


Sequence ID>WENV180097262
Genome IDMTBK01176939
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 155830
End posion on genome 155745
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cttgctctgt
tRNA gene sequence 
GGAGGGATGGCCGAGCGGTTGAAGGCGCCTGTCTTGAAAACAGGTTTAGGGAAACCTAAC
GTGGGTTCGAATCCCACTTCCTCCGCtg
Downstream region at tRNA end position 
aacagacctt
Secondary structure (Cloverleaf model)
>WENV180097262	Ser	TGA
                   t      GCtg aacagacctt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TTTAGGGAAACCTAAC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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