The detailed information of tRNA gene sequence


Sequence ID>WENV180097271
Genome IDMTBK01177626
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1533
End posion on genome 1607
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
taatggcacg
tRNA gene sequence 
GGGGCAGTAGGGTAGCCTGGTCCATCCTAGAGCGTTTGGGACGCTTTGACGGCAGTTCGA
ATCTGCCCTGCCCCAtca
Downstream region at tRNA end position 
gttatgaatc
Secondary structure (Cloverleaf model)
>WENV180097271	Pro	TGG
                   g      Atca gttatgaatc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     C C G T C     A
    C C G A        A      | | | | |     G
  T         T G G G       G G C A G     C
  G           | | +                 T T
  G         T C C T
    T C C A        A     TGAC
                    G + T
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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