The detailed information of tRNA gene sequence


Sequence ID>WENV180097272
Genome IDMTBK01177720
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 579
End posion on genome 661
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gatagataaa
tRNA gene sequence 
GGAGGGTTGGCAGAATGGTATTGCGCCGCTCTCGAAAAGCGGTGGGTGAAAACCCTTAGA
GGTTCGAATCCTCTACCCTCCGCta
Downstream region at tRNA end position 
ttgttttaat
Secondary structure (Cloverleaf model)
>WENV180097272	Ser	CGA
                   a      GCta ttgttttaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     T C T C C     A
        A A        G      | | | | |     G
      T     G A C G       A G A G G     C
      G     + | | |                 T T
      G     T T G C
        T A        G     TGGGTGAAAACCCTT
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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