The detailed information of tRNA gene sequence


Sequence ID>WENV180097275
Genome IDMTBK01177777
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 799
End posion on genome 714
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcggctgttc
tRNA gene sequence 
GGAGGGATGGCAGAGCGGACGAATGCGACGGTCTTGAAAACCGTTGAGGTGCAAGCCTCC
GGGGGTTCGAATCCCCCTCCCTCCGCag
Downstream region at tRNA end position 
cgaaaagccc
Secondary structure (Cloverleaf model)
>WENV180097275	Ser	TGA
                   c      GCag cgaaaagccc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    A       A T G C
      C G A        G     TGAGGTGCAAGCCTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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