The detailed information of tRNA gene sequence


Sequence ID>WENV180097276
Genome IDMTBK01177777
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 599
End posion on genome 506
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttttcgcctt
tRNA gene sequence 
GGAGAGGTGACGGAGTCCGGTCGAACGTGCCTCCCTGCTAAGGAGGTGACTGCCGCAAGG
TGGTCCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
aaaatgtgat
Secondary structure (Cloverleaf model)
>WENV180097276	Ser	GCT
                   t      GCCA aaaatgtgat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     A
  C         G G C A       G T G G G     C
  G           | | |                 T T
  G         A C G T
    T C G A        G     TGACTGCCGCAAGGTGGTCC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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