The detailed information of tRNA gene sequence


Sequence ID>WENV180097285
Genome IDMTBK01178524
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 8087
End posion on genome 8176
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttatttataa
tRNA gene sequence 
GGAGAGGTGGCCGAGTTGGTCGAAGGCGCGCGCCTGGAAAGTGCGTAAACTCCAAAAGGG
TTTCGTGGGTTCGAATCCCACTCTCTCCGCaa
Downstream region at tRNA end position 
cgacaatatt
Secondary structure (Cloverleaf model)
>WENV180097285	Ser	GGA
                   a      GCaa cgacaatatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G C C G       G T G G G     C
  G           | | |                 T T
  T         A G G C
    C G A          G     TAAACTCCAAAAGGGTTTC
                    C - G
                    G - C
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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