The detailed information of tRNA gene sequence


Sequence ID>WENV180097295
Genome IDMTBK01179076
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 7424
End posion on genome 7349
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aatgtgttgc
tRNA gene sequence 
AGGACAGTAGTTCAACTGGTAGAGCACCGGTCTCCAAAACCGGGGGTTGCGGGTTCGATT
CCTGCCTGTCCTGCCA
Downstream region at tRNA end position 
ctattgaaat
Secondary structure (Cloverleaf model)
>WENV180097295	Trp	CCA
                   c      GCCA ctattgaaat
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C          T T
                    T     C G T C C     A
      C A A        A      | | + | |     G
    T       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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