The detailed information of tRNA gene sequence


Sequence ID>WENV180097297
Genome IDMTBK01179362
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 33011
End posion on genome 32936
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ggaatttact
tRNA gene sequence 
GGGGTTGTAGCTCAGATGGGAGAGCGCTTGAATGGCATTCAAGAGGTCAGGAGTTCGATC
CTCCTCAGCTCCACCA
Downstream region at tRNA end position 
aaacacaaaa
Secondary structure (Cloverleaf model)
>WENV180097297	Ala	GGC
                   t      ACCA aaacacaaaa
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     T - A
                     G - C          C T
                    T     T C C T C     A
      A G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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