The detailed information of tRNA gene sequence


Sequence ID>WENV180097313
Genome IDMTBK01181064
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 8435
End posion on genome 8345
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gatcgctcgc
tRNA gene sequence 
GGTGGCGTGTCCGAGCGGCCTAAGGAGCACGCCTCGAAAGCGTGTGACGGGTAACCCCCG
TCCGAGGGTTCAAATCCCTCCGCCACCGCCA
Downstream region at tRNA end position 
taaccacccg
Secondary structure (Cloverleaf model)
>WENV180097313	Ser	CGA
                   c      GCCA taaccacccg
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C T A        G     TGACGGGTAACCCCCGTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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