The detailed information of tRNA gene sequence


Sequence ID>WENV180097315
Genome IDMTBK01181261
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 663
End posion on genome 739
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgaaaatcat
tRNA gene sequence 
GGCGGTGTAGCTCAGTTGGTCAGAGCATACGGCTCATATCCGTAGTGTCCCTGGTTCAAA
TCCAGGCACCGCCACCA
Downstream region at tRNA end position 
ttttaaagta
Secondary structure (Cloverleaf model)
>WENV180097315	Met	CAT
                   t      ACCA ttttaaagta
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     G G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     GTGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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