The detailed information of tRNA gene sequence


Sequence ID>WENV180097317
Genome IDMTBK01181291
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2
End posion on genome 74
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
TGCGGGGTAGAGCAGTGGCAGCTCGTCGGGCTCATAACCCGGAGGTCAGTGGTTCGAATC
CACTCCCCGCTACta
Downstream region at tRNA end position 
gagtcaaacc
Secondary structure (Cloverleaf model)
>WENV180097317	fMet	CAT
                   c      ACta gagtcaaacc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C A C C     A
        G A        A      | | | | |     G
      T     C G A G       A G T G G     C
      G     | | | |                 T T
      G     G C T C
        C A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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