The detailed information of tRNA gene sequence


Sequence ID>WENV180097319
Genome IDMTBK01181474
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 403
End posion on genome 321
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
agttcagcgc
tRNA gene sequence 
GGCAGGTTGCCCGAGCGGCCAAAGGGAGCGGTCTGTAAAATCGTCGGCAAAGCCTTCGTA
GGTTCGAATCCTACACCTGCCACta
Downstream region at tRNA end position 
tcggcccggc
Secondary structure (Cloverleaf model)
>WENV180097319	Tyr	GTA
                   c      ACta tcggcccggc
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     C A T C C     A
      C G A        G      | | | | |     G
    G       G C C C       G T A G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGGCAAAGCCTTC
                    G + T
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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