The detailed information of tRNA gene sequence


Sequence ID>WENV180097321
Genome IDMTBK01181527
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1793
End posion on genome 1716
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aagtttgagc
tRNA gene sequence 
GGAGGCGTGGTGTAGCTGGTCTAACATACCTGCCTGTCACGCAGGAGATCGCGGGTTCGA
ATCCCGTCGCTTCCGCCA
Downstream region at tRNA end position 
ttttttttgt
Secondary structure (Cloverleaf model)
>WENV180097321	Asp	GTC
                   c      GCCA ttttttttgt
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     C - G
                     G - C          T A
                    T     T G C C C     A
    T C G A        G      + | | | |     G
  G         T G T G       G C G G G     C
  G         | | | +                 T T
  T         A C A T
    C T A          A     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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