The detailed information of tRNA gene sequence


Sequence ID>WENV180097324
Genome IDMTBK01181857
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 13
End posion on genome 89
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
catacactct
tRNA gene sequence 
GGAGGCGTAGCTCAGCTGGTTAGAGCGTTCGGTTCACATCCGAGAGGTCGCGGGTTCGAG
CCCCTCCGTCTCCACCA
Downstream region at tRNA end position 
cattgccgcg
Secondary structure (Cloverleaf model)
>WENV180097324	Val	CAC
                   t      ACCA cattgccgcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     C - G
                     G - C          C G
                    T     C T C C C     A
      C G A        A      |   | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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