The detailed information of tRNA gene sequence


Sequence ID>WENV180097328
Genome IDMTBK01182163
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 622
End posion on genome 711
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgcaagacct
tRNA gene sequence 
GGAGTGGTGGCCGAGCGGCTAATGGCGCACGCCTGCTAAGCGTGAGGGGCCAAAAGTCCC
ACGTGAGTTCGAATCTCACCCACTCCGCCA
Downstream region at tRNA end position 
actcggcccg
Secondary structure (Cloverleaf model)
>WENV180097328	Ser	GCT
                   t      GCCA actcggcccg
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G       + | | |                 T T
    C       T G G C
      T A A        G     AGGGGCCAAAAGTCCCAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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