The detailed information of tRNA gene sequence


Sequence ID>WENV180097329
Genome IDMTBK01182229
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 91
End posion on genome 15
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
atcgacatga
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCGGGTTCGAA
TCCCGCCCCCGCTACCA
Downstream region at tRNA end position 
agtaattgac
Secondary structure (Cloverleaf model)
>WENV180097329	fMet	CAT
                   a      ACCA agtaattgac
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    C       C G A G       G C G G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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