The detailed information of tRNA gene sequence


Sequence ID>WENV180097339
Genome IDMTBK01182899
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2613
End posion on genome 2685
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ctttaaaaat
tRNA gene sequence 
GGCCCTGTAGTTCAATGGATAGAACGAAAGTTTCCTAAACTTTAAATCTAGGTTCGATTC
CTAGCGGGGCTACta
Downstream region at tRNA end position 
aaaaacttac
Secondary structure (Cloverleaf model)
>WENV180097339	Arg	CCT
                   t      ACta aaaaacttac
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C          T T
                    T     G A T C C     A
      T A A        A      | | | | |     G
    G       C T T G       C T A G G     C
    G       | | | |                 T T
    A       G A A C
      T A          G     AAAT
                    A - T
                    A - T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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