The detailed information of tRNA gene sequence


Sequence ID>WENV180097340
Genome IDMTBK01182899
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2459
End posion on genome 2385
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
gataaaaaaa
tRNA gene sequence 
GCGCCTATAGCTCAGTTGGTTAGAGCAACTGACTCATAATCAGTAGGTCCCTGGTTCAAG
TCCAGGTAGGCGCACag
Downstream region at tRNA end position 
aaaaaccact
Secondary structure (Cloverleaf model)
>WENV180097340	Ile2	CAT
                   a      ACag aaaaaccact
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     G G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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