The detailed information of tRNA gene sequence


Sequence ID>WENV180097345
Genome IDMTBK01183291
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 206
End posion on genome 117
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
gattgtaaaa
tRNA gene sequence
GGAGAGATGGGTGAGTGGCTTAAACCAGCAGTTTGCTAAACTGCCGTACGGGAAACTGTA
CCGGGGGTTCGAATCCCCCTTTCTCCGCCA
Downstream region at tRNA end position
accgggcaag
Secondary structure (Cloverleaf model)
>WENV180097345	Ser	GCT
                   a      GCCA accgggcaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T T A        A     CGTACGGGAAACTGTACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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