The detailed information of tRNA gene sequence


Sequence ID>WENV180097347
Genome IDMTBK01183410
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 662
End posion on genome 578
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aattaaataa
tRNA gene sequence 
GGAAAGGTGTCCGAGAGGCCAAAGGAGCACGGTTGGAAACCGTGTGTTGCGCAAGTAACC
GGGGGTTCGAATCCCCCCCTTTCCGaaa
Downstream region at tRNA end position 
atagatttta
Secondary structure (Cloverleaf model)
>WENV180097347	Ser	GGA
                   a      Gaaa atagatttta
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      A G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    C       A G G A
      C A A        G     TGTTGCGCAAGTAACC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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