The detailed information of tRNA gene sequence


Sequence ID>WENV180097348
Genome IDMTBK01183506
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 15
End posion on genome 90
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aaaatttcgt
tRNA gene sequence 
CGCGGGGTGGAGCAGCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCTGGTTCAAAT
CCAGCCCCCGCCACCA
Downstream region at tRNA end position 
tttttttcaa
Secondary structure (Cloverleaf model)
>WENV180097348	fMet	CAT
                   t      ACCA tttttttcaa
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      C G A        G      | | | | |     A
    T       C G A G       G C T G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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