The detailed information of tRNA gene sequence


Sequence ID>WENV180097358
Genome IDMTBK01184043
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 231
End posion on genome 157
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttgtttatgt
tRNA gene sequence 
GCCGCTATCGTCTAACGGTTAGGACACAGGATTCTCAATCCTGCAATCGGGGTTCGATTC
CCCGTAGCGGTACCA
Downstream region at tRNA end position 
tattatcttg
Secondary structure (Cloverleaf model)
>WENV180097358	Glu	CTC
                   t      ACCA tattatcttg
                     G + T
                     C - G
                     C - G
                     G - C
                     C - G
                     T - A
                     A - T          T T
                    T     G C C C C     A
      C A A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     CAAT
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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