The detailed information of tRNA gene sequence


Sequence ID>WENV180097362
Genome IDMTBK01184164
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 442
End posion on genome 367
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gattttccgt
tRNA gene sequence 
GGGGATGTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGCCAGCGGTTCGATT
CCGCTCATCTCCACCA
Downstream region at tRNA end position 
aattgcacct
Secondary structure (Cloverleaf model)
>WENV180097362	Ala	TGC
                   t      ACCA aattgcacct
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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