The detailed information of tRNA gene sequence


Sequence ID>WENV180097364
Genome IDMTBK01184279
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 687
End posion on genome 613
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cagttattgc
tRNA gene sequence 
GGGGACGTAGCTCAGGGGGAGAGCGCTTGACTCACATTCAAGAGGTCGGAGGTTCGAAAC
CTCTCGTCCCCACCA
Downstream region at tRNA end position 
ccggtatatt
Secondary structure (Cloverleaf model)
>WENV180097364	Val	CAC
                   c      ACCA ccggtatatt
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          A A
                    T     T C T C C     A
        G A        A      + | | | |     G
      G     C T C G       G G A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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