The detailed information of tRNA gene sequence


Sequence ID>WENV180097365
Genome IDMTBK01184350
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1748
End posion on genome 1674
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
attatgttgc
tRNA gene sequence 
CGGGATGTGGCGCAGTTTGGTAGCGCACTAGCATGGGGTGTTAGGGGCCGCAAGTTCGAA
TCTTGTCATCCCGACtt
Downstream region at tRNA end position 
aaaaaccgca
Secondary structure (Cloverleaf model)
>WENV180097365	Pro	GGG
                   c      ACtt aaaaaccgca
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G T T C     A
      T G A        G      + | | | |     G
    T       C G C G       G C A A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    A - T
                    G + T
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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