The detailed information of tRNA gene sequence


Sequence ID>WENV180097366
Genome IDMTBK01184477
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 80
End posion on genome 6
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tcgctccttc
tRNA gene sequence 
GGGGGTGTAGCTCAGCCCGGTAGAGCGCTACGTTCGCAACGTAGAAGTCGTGGGTTCAAG
TCCCATCACCTCCACtc
Downstream region at tRNA end position 
tccnnnnnnn
Secondary structure (Cloverleaf model)
>WENV180097366	Ala	CGC
                   c      ACtc tccnnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T A C C C     A
      C G A        A      + | | | |     A
    C       C T C G       G T G G G     C
    C       | | | |                 T T
    G       G A G C
      G T A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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