The detailed information of tRNA gene sequence


Sequence ID>WENV180097368
Genome IDMTBK01184558
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2611
End posion on genome 2700
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgatattata
tRNA gene sequence 
GGAGGCGTGCCAGAGTGGTTGAATGGGCCGCACTCGAAATGCGGTATCCCATTTTTGGGA
TCGGAGGTTCGAATCCTCCCGCCTCCGCCA
Downstream region at tRNA end position 
attttcaaaa
Secondary structure (Cloverleaf model)
>WENV180097368	Ser	CGA
                   a      GCCA attttcaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C C T C C     A
      T G A        G      | | | | |     G
    G       G A C C       G G A G G     C
    G         | | |                 T T
    T       A T G G
      T G A        G     TATCCCATTTTTGGGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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