The detailed information of tRNA gene sequence


Sequence ID>WENV180097369
Genome IDMTBK01184584
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3271
End posion on genome 3186
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
ttaaaaacgc
tRNA gene sequence 
GCGAGCGTGGCGGAATGGCAGACGCGCTAGGTTCAGGACCTAGTGGGTGTAGGCCCGTGG
AGGTTCAAGTCCTCTCGCTCGCACCA
Downstream region at tRNA end position 
taagtttagg
Secondary structure (Cloverleaf model)
>WENV180097369	Leu	CAG
                   c      ACCA taagtttagg
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T G
                    T     T C T C C     A
      T A A        G      + | | | |     A
    G       G G C G       G G A G G     C
    G         | | |                 T T
    C       A C G C
      A G          G     TGGGTGTAGGCCCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    G - C
                  T       A
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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